Clonal reproduction and natural variation of Populus canescens patches.
Identifieur interne : 003339 ( Main/Exploration ); précédent : 003338; suivant : 003340Clonal reproduction and natural variation of Populus canescens patches.
Auteurs : Caiyun He [République populaire de Chine] ; Shuxing Zheng ; Jianguo Zhang ; Aiguo Duan ; Yanfei Zeng ; Kai CuiSource :
- Tree physiology [ 0829-318X ] ; 2010.
Descripteurs français
- KwdFr :
- ADN des plantes (analyse), Adaptation physiologique (MeSH), Chine (MeSH), Feuilles de plante (croissance et développement), Feuilles de plante (génétique), Feuilles de plante (métabolisme), Génotype (MeSH), Isoformes de protéines (MeSH), Marqueurs génétiques (MeSH), Maturation post-traductionnelle des protéines (MeSH), Métabolisme énergétique (MeSH), Phénotype (MeSH), Populus (croissance et développement), Populus (génétique), Populus (métabolisme), Protéines végétales (génétique), Protéines végétales (métabolisme), Protéomique (méthodes), Reproduction (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Répétitions microsatellites (MeSH), Variation génétique (MeSH), Écosystème (MeSH).
- MESH :
- analyse : ADN des plantes.
- croissance et développement : Feuilles de plante, Populus.
- génétique : Feuilles de plante, Populus, Protéines végétales.
- métabolisme : Feuilles de plante, Populus, Protéines végétales.
- méthodes : Protéomique.
- Adaptation physiologique, Chine, Génotype, Isoformes de protéines, Marqueurs génétiques, Maturation post-traductionnelle des protéines, Métabolisme énergétique, Phénotype, Reproduction, Régulation de l'expression des gènes végétaux, Répétitions microsatellites, Variation génétique, Écosystème.
- Wicri :
- geographic : République populaire de Chine.
English descriptors
- KwdEn :
- Adaptation, Physiological (MeSH), China (MeSH), DNA, Plant (analysis), Ecosystem (MeSH), Energy Metabolism (MeSH), Gene Expression Regulation, Plant (MeSH), Genetic Markers (MeSH), Genetic Variation (MeSH), Genotype (MeSH), Microsatellite Repeats (MeSH), Phenotype (MeSH), Plant Leaves (genetics), Plant Leaves (growth & development), Plant Leaves (metabolism), Plant Proteins (genetics), Plant Proteins (metabolism), Populus (genetics), Populus (growth & development), Populus (metabolism), Protein Isoforms (MeSH), Protein Processing, Post-Translational (MeSH), Proteomics (methods), Reproduction (MeSH).
- MESH :
- chemical , analysis : DNA, Plant.
- chemical , genetics : Plant Proteins.
- chemical , metabolism : Plant Proteins.
- geographic : China, Genetic Markers, Protein Isoforms.
- genetics : Plant Leaves, Populus.
- growth & development : Plant Leaves, Populus.
- metabolism : Plant Leaves, Populus.
- methods : Proteomics.
- Adaptation, Physiological, Ecosystem, Energy Metabolism, Gene Expression Regulation, Plant, Genetic Variation, Genotype, Microsatellite Repeats, Phenotype, Protein Processing, Post-Translational, Reproduction.
Abstract
Trees growing in their natural habitat represent a valuable resource for elucidating mechanisms of adaptation to environmental constraints. Along the Erqis river, there are various Populus forests, which provide 'natural laboratories' for studying tree ecophysiological responses to their habitat. Reproduction strategies and natural variation of the 'mosaic' distributed Populus canescens patches were studied using a proteomic approach and nuclear microsatellite markers. Clonal reproduction was the primary reproduction strategy of these P. canescens patches. Forty-eight percent of the locations represented in one or two P. canescens patches were identified. In total, 83 different proteins were identified in 118 of 119 protein spots, most of them involved in metabolism. Distinct proteomes and post-translational modifications were found in different P. canescens patches. The differences in the proteomes originate both from the expression of different protein isoforms with the same function and from the differential expression of proteins with different functions, suggesting that different patches might have a functional basis for their adaptation to their environments. Our studies provide a good example of applying proteomics to measure natural variation between patches and will provide a basis for understanding how trees survive through their responses to natural conditions.
DOI: 10.1093/treephys/tpq083
PubMed: 21030405
Affiliations:
Links toward previous steps (curation, corpus...)
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sort="Zhang, Jianguo" uniqKey="Zhang J" first="Jianguo" last="Zhang">Jianguo Zhang</name></author><author><name sortKey="Duan, Aiguo" sort="Duan, Aiguo" uniqKey="Duan A" first="Aiguo" last="Duan">Aiguo Duan</name></author><author><name sortKey="Zeng, Yanfei" sort="Zeng, Yanfei" uniqKey="Zeng Y" first="Yanfei" last="Zeng">Yanfei Zeng</name></author><author><name sortKey="Cui, Kai" sort="Cui, Kai" uniqKey="Cui K" first="Kai" last="Cui">Kai Cui</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2010">2010</date><idno type="RBID">pubmed:21030405</idno><idno type="pmid">21030405</idno><idno type="doi">10.1093/treephys/tpq083</idno><idno type="wicri:Area/Main/Corpus">003024</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">003024</idno><idno type="wicri:Area/Main/Curation">003024</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">003024</idno><idno 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de protéines (MeSH)</term><term>Marqueurs génétiques (MeSH)</term><term>Maturation post-traductionnelle des protéines (MeSH)</term><term>Métabolisme énergétique (MeSH)</term><term>Phénotype (MeSH)</term><term>Populus (croissance et développement)</term><term>Populus (génétique)</term><term>Populus (métabolisme)</term><term>Protéines végétales (génétique)</term><term>Protéines végétales (métabolisme)</term><term>Protéomique (méthodes)</term><term>Reproduction (MeSH)</term><term>Régulation de l'expression des gènes végétaux (MeSH)</term><term>Répétitions microsatellites (MeSH)</term><term>Variation génétique (MeSH)</term><term>Écosystème (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>DNA, Plant</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Plant Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Plant 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Along the Erqis river, there are various Populus forests, which provide 'natural laboratories' for studying tree ecophysiological responses to their habitat. Reproduction strategies and natural variation of the 'mosaic' distributed Populus canescens patches were studied using a proteomic approach and nuclear microsatellite markers. Clonal reproduction was the primary reproduction strategy of these P. canescens patches. Forty-eight percent of the locations represented in one or two P. canescens patches were identified. In total, 83 different proteins were identified in 118 of 119 protein spots, most of them involved in metabolism. Distinct proteomes and post-translational modifications were found in different P. canescens patches. The differences in the proteomes originate both from the expression of different protein isoforms with the same function and from the differential expression of proteins with different functions, suggesting that different patches might have a functional basis for their adaptation to their environments. Our studies provide a good example of applying proteomics to measure natural variation between patches and will provide a basis for understanding how trees survive through their responses to natural conditions.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">21030405</PMID><DateCompleted><Year>2011</Year><Month>01</Month><Day>11</Day></DateCompleted><DateRevised><Year>2010</Year><Month>10</Month><Day>29</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0829-318X</ISSN><JournalIssue CitedMedium="Print"><Volume>30</Volume><Issue>11</Issue><PubDate><Year>2010</Year><Month>Nov</Month></PubDate></JournalIssue><Title>Tree physiology</Title><ISOAbbreviation>Tree Physiol</ISOAbbreviation></Journal><ArticleTitle>Clonal reproduction and natural variation of Populus canescens patches.</ArticleTitle><Pagination><MedlinePgn>1383-90</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1093/treephys/tpq083</ELocationID><Abstract><AbstractText>Trees growing in their natural habitat represent a valuable resource for elucidating mechanisms of adaptation to environmental constraints. Along the Erqis river, there are various Populus forests, which provide 'natural laboratories' for studying tree ecophysiological responses to their habitat. Reproduction strategies and natural variation of the 'mosaic' distributed Populus canescens patches were studied using a proteomic approach and nuclear microsatellite markers. Clonal reproduction was the primary reproduction strategy of these P. canescens patches. Forty-eight percent of the locations represented in one or two P. canescens patches were identified. In total, 83 different proteins were identified in 118 of 119 protein spots, most of them involved in metabolism. Distinct proteomes and post-translational modifications were found in different P. canescens patches. The differences in the proteomes originate both from the expression of different protein isoforms with the same function and from the differential expression of proteins with different functions, suggesting that different patches might have a functional basis for their adaptation to their environments. Our studies provide a good example of applying proteomics to measure natural variation between patches and will provide a basis for understanding how trees survive through their responses to natural conditions.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>He</LastName><ForeName>Caiyun</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Key Laboratory of Silviculture of the State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, People's Republic of China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zheng</LastName><ForeName>Shuxing</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Jianguo</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Duan</LastName><ForeName>Aiguo</ForeName><Initials>A</Initials></Author><Author 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PubStatus="entrez"><Year>2010</Year><Month>10</Month><Day>30</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2010</Year><Month>10</Month><Day>30</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2011</Year><Month>1</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">21030405</ArticleId><ArticleId IdType="pii">tpq083</ArticleId><ArticleId IdType="doi">10.1093/treephys/tpq083</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>République populaire de Chine</li></country><settlement><li>Pékin</li></settlement></list><tree><noCountry><name sortKey="Cui, Kai" sort="Cui, Kai" uniqKey="Cui K" first="Kai" last="Cui">Kai Cui</name><name sortKey="Duan, Aiguo" sort="Duan, Aiguo" uniqKey="Duan A" first="Aiguo" last="Duan">Aiguo Duan</name><name sortKey="Zeng, Yanfei" sort="Zeng, Yanfei" uniqKey="Zeng Y" first="Yanfei" last="Zeng">Yanfei Zeng</name><name sortKey="Zhang, Jianguo" sort="Zhang, Jianguo" uniqKey="Zhang J" first="Jianguo" last="Zhang">Jianguo Zhang</name><name sortKey="Zheng, Shuxing" sort="Zheng, Shuxing" uniqKey="Zheng S" first="Shuxing" last="Zheng">Shuxing Zheng</name></noCountry><country name="République populaire de Chine"><noRegion><name sortKey="He, Caiyun" sort="He, Caiyun" uniqKey="He C" first="Caiyun" last="He">Caiyun He</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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